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  • histocartography package
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  • Overview: module code

All modules for which code is available

  • histocartography.interpretability.base_explainer
  • histocartography.interpretability.grad_cam
  • histocartography.interpretability.graph_pruning_explainer
  • histocartography.interpretability.lrp_gnn_explainer
  • histocartography.metrics.metrics
  • histocartography.ml.layers.constants
  • histocartography.ml.layers.dense_gin_layer
  • histocartography.ml.layers.gin_layer
  • histocartography.ml.layers.mlp
  • histocartography.ml.layers.multi_layer_gnn
  • histocartography.ml.layers.pna_layer
  • histocartography.ml.models.base_model
  • histocartography.ml.models.cell_graph_model
  • histocartography.ml.models.hact_model
  • histocartography.ml.models.hovernet
  • histocartography.ml.models.tissue_graph_model
  • histocartography.pipeline
  • histocartography.preprocessing.assignment_matrix
  • histocartography.preprocessing.feature_extraction
  • histocartography.preprocessing.graph_builders
  • histocartography.preprocessing.io
  • histocartography.preprocessing.nuclei_concept_extraction
  • histocartography.preprocessing.nuclei_extraction
  • histocartography.preprocessing.stain_normalizers
  • histocartography.preprocessing.stats
  • histocartography.preprocessing.superpixel
  • histocartography.preprocessing.tissue_mask
  • histocartography.preprocessing.utils
  • histocartography.utils
    • histocartography.utils.draw_utils
    • histocartography.utils.graph
    • histocartography.utils.image
    • histocartography.utils.io
    • histocartography.utils.torch
  • histocartography.visualization.visualization

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