:autogenerated:

histocartography.ml package
===========================

.. automodule:: histocartography.ml
    



    Subpackages:

    .. toctree::
       :maxdepth: 1

       histocartography.ml.layers
       histocartography.ml.models



    Summary
    -------

    ``__all__`` Classes:


    .. list-table::
    
       * - :class:`CellGraphModel <histocartography.ml.models.cell_graph_model.CellGraphModel>`
         - Cell Graph Model.
       * - :class:`DenseGINLayer <histocartography.ml.layers.dense_gin_layer.DenseGINLayer>`
         - Base class for all neural network modules.
       * - :class:`GINLayer <histocartography.ml.layers.gin_layer.GINLayer>`
         - Base class for all neural network modules.
       * - :class:`HACTModel <histocartography.ml.models.hact_model.HACTModel>`
         - HACT model.
       * - :class:`MultiLayerGNN <histocartography.ml.layers.multi_layer_gnn.MultiLayerGNN>`
         - MultiLayer network that concatenates several gnn layers.
       * - :class:`PNALayer <histocartography.ml.layers.pna_layer.PNALayer>`
         - Base class for all neural network modules.
       * - :class:`TissueGraphModel <histocartography.ml.models.tissue_graph_model.TissueGraphModel>`
         - Tissue Graph Model.
    



Reference
---------
If you use `histocartography` in your projects, please cite the following:

.. code-block:: python

    @inproceedings{pati2021,
        title = {Hierarchical Graph Representations for Digital Pathology},
        author = {Pushpak Pati, Guillaume Jaume, Antonio Foncubierta, Florinda Feroce, Anna Maria Anniciello, Giosuè Scognamiglio, Nadia Brancati, Maryse Fiche, Estelle Dubruc, Daniel Riccio, Maurizio Di Bonito, Giuseppe De Pietro, Gerardo Botti, Jean-Philippe Thiran, Maria Frucci, Orcun Goksel, Maria Gabrani},
        booktitle = {https://arxiv.org/pdf/2102.11057},
        year = {2021}
    }